| actions_after_solve() | MD | inlineprotectedvirtual |
| actions_after_time_step() | MD | inlineprotectedvirtual |
| actions_before_time_loop() | MD | inlineprotectedvirtual |
| actions_before_time_step() | MD | inlineprotectedvirtual |
| add_ene_ela(Mdouble new_) | MD | inline |
| add_Species(CSpecies &S) | MD | |
| add_Species(void) | MD | inline |
| auto_number() | STD_save | inline |
| auto_setdim() | StatisticsVector< T > | protected |
| average(std::vector< StatisticsPoint< T > > &P) | StatisticsVector< T > | |
| broad_phase(BaseParticle *i) | MD | inlineprotectedvirtual |
| CG_type | StatisticsVector< T > | protected |
| CGPolynomial | StatisticsVector< T > | protected |
| check_current_time_for_statistics() | StatisticsVector< T > | inline |
| checkInteractionWithBoundaries() | MD | protectedvirtual |
| compute_all_forces() | MD | protectedvirtual |
| compute_external_forces(BaseParticle *PI) | MD | protectedvirtual |
| compute_internal_forces(BaseParticle *i) | MD | protectedvirtual |
| compute_internal_forces(BaseParticle *P1, BaseParticle *P2) | MD | protectedvirtual |
| compute_particle_masses() | MD | inlineprotected |
| compute_plastic_internal_forces(BaseParticle *P1, BaseParticle *P2) | MD | protected |
| compute_walls(BaseParticle *PI) | MD | protectedvirtual |
| computeShortRangeForceWithParticle(BaseParticle *PI, BaseParticle *PJ, BaseParticle *PJreal, CSpecies *pSpecies, Mdouble dist) | MD | protected |
| computeShortRangeForceWithWall(BaseParticle *pI, int wall, CSpecies *pSpecies, Mdouble dist) | MD | protected |
| constructor() | StatisticsVector< T > | |
| constructor(std::string name) | StatisticsVector< T > | |
| continue_solve() | MD | inlineprotectedvirtual |
| cout_time() | MD | inlineprotectedvirtual |
| create_xballs_script() | MD | virtual |
| cutoff | StatisticsVector< T > | protected |
| cutoff2 | StatisticsVector< T > | protected |
| data_file | STD_save | protected |
| data_filename | STD_save | protected |
| do_integration_after_force_computation(BaseParticle *pI) | MD | protectedvirtual |
| do_integration_before_force_computation(BaseParticle *pI) | MD | protectedvirtual |
| doGradient | StatisticsVector< T > | protected |
| doTimeAverage | StatisticsVector< T > | protected |
| doublePoints | StatisticsVector< T > | protected |
| doVariance | StatisticsVector< T > | protected |
| dx | StatisticsVector< T > | protected |
| dxTimeAverage | StatisticsVector< T > | protected |
| dy | StatisticsVector< T > | protected |
| dyTimeAverage | StatisticsVector< T > | protected |
| dz | StatisticsVector< T > | protected |
| dzTimeAverage | StatisticsVector< T > | protected |
| ene_file | STD_save | protected |
| ene_filename | STD_save | protected |
| evaluate_force_statistics(int wp=0) | StatisticsVector< T > | |
| evaluate_particle_statistics(std::vector< BaseParticle * >::iterator P, int wp=0) | StatisticsVector< T > | |
| evaluate_wall_force_statistics(Vec3D P, int wp=0) | StatisticsVector< T > | |
| evaluateIntegral(Mdouble n1, Mdouble n2, Mdouble t) | StatisticsVector< T > | inline |
| evaluatePolynomial(Mdouble r) | StatisticsVector< T > | inline |
| evaluatePolynomialGradient(Mdouble r) | StatisticsVector< T > | inline |
| file_counter | STD_save | protected |
| FileExists(std::string strFilename) | STD_save | |
| find_next_data_file(Mdouble tmin, bool verbose=true) | MD | |
| finish_statistics() | StatisticsVector< T > | virtual |
| format | StatisticsVector< T > | protected |
| fstat_file | STD_save | protected |
| fstat_filename | STD_save | protected |
| fstat_header() | MD | protectedvirtual |
| gather_force_statistics_from_fstat_and_data() | StatisticsVector< T > | |
| gather_force_statistics_from_p3c(int version) | StatisticsVector< T > | |
| gather_force_statistics_from_p3w(int version, std::vector< int > &index) | StatisticsVector< T > | |
| gather_statistics_collision(int index1, int index2, Vec3D Contact, Mdouble delta, Mdouble ctheta, Mdouble fdotn, Mdouble fdott, Vec3D P1_P2_normal_, Vec3D P1_P2_tangential) | StatisticsVector< T > | virtual |
| get_append() | MD | inline |
| get_CG_type() | StatisticsVector< T > | inline |
| get_collision_time(Mdouble mass, unsigned int indSpecies=0) | MD | inline |
| get_counter() | STD_save | |
| get_cutoff() | StatisticsVector< T > | inline |
| get_cutoff2() | StatisticsVector< T > | inline |
| get_data_file() | STD_save | inline |
| get_data_filename() | STD_save | inline |
| get_depth(unsigned int indSpecies=0) | MD | inline |
| get_dim() | MD | inline |
| get_dim_particle(unsigned int indSpecies=0) | MD | inline |
| get_disp(unsigned int indSpecies=0) | MD | inline |
| get_disprolling(unsigned int indSpecies=0) | MD | inline |
| get_dispt(unsigned int indSpecies=0) | MD | inline |
| get_disptorsion(unsigned int indSpecies=0) | MD | inline |
| get_dissipation(unsigned int indSpecies=0) | MD | inline |
| get_do_stat_always() | MD | inline |
| get_doGradient() | StatisticsVector< T > | inline |
| get_doTimeAverage() | StatisticsVector< T > | inline |
| get_doublePoints() | StatisticsVector< T > | inline |
| get_doVariance() | StatisticsVector< T > | inline |
| get_dt() | MD | inline |
| get_ene_ela() | MD | inline |
| get_ene_file() | STD_save | inline |
| get_ene_filename() | STD_save | inline |
| get_file_counter() | STD_save | inline |
| get_format() | MD | inline |
| get_fstat_file() | STD_save | inline |
| get_fstat_filename() | STD_save | inline |
| get_gravity() | MD | inline |
| get_HGRID_UpdateEachTimeStep() | MD | inlineprotectedvirtual |
| get_ignoreFixedParticles() | StatisticsVector< T > | inline |
| get_k(int indSpecies=0) | MD | inline |
| get_k1(unsigned int indSpecies=0) | MD | inline |
| get_k2max(unsigned int indSpecies=0) | MD | inline |
| get_kc(unsigned int indSpecies=0) | MD | inline |
| get_krolling(int indSpecies=0) | MD | inline |
| get_kt(int indSpecies=0) | MD | inline |
| get_ktorsion(int indSpecies=0) | MD | inline |
| get_Mass_from_Radius(Mdouble radius, int indSpecies=0) | MD | inline |
| get_max_radius() | MD | inline |
| get_maximum_velocity(BaseParticle &P) | MD | inline |
| get_maximum_velocity() | MD | inline |
| get_mirrorAtDomainBoundary() | StatisticsVector< T > | inline |
| get_MixedSpecies(int i, int j) | MD | inline |
| get_mu(unsigned int indSpecies=0) | MD | inline |
| get_murolling(unsigned int indSpecies=0) | MD | inline |
| get_mutorsion(unsigned int indSpecies=0) | MD | inline |
| get_n(int &nx_, int &ny_, int &nz_) | StatisticsVector< T > | inline |
| get_name() | STD_save | inline |
| get_NSpecies() | MD | inline |
| get_nTimeAverage() | StatisticsVector< T > | inline |
| get_numbers(int size_x, int size_y) | STD_save | |
| get_nx() | StatisticsVector< T > | inline |
| get_ny() | StatisticsVector< T > | inline |
| get_nz() | StatisticsVector< T > | inline |
| get_options_data(void) | STD_save | inline |
| get_options_ene(void) | STD_save | inline |
| get_options_fstat(void) | STD_save | inline |
| get_options_restart(void) | STD_save | inline |
| get_options_stat(void) | STD_save | inline |
| get_periodicWalls() | StatisticsVector< T > | inline |
| get_plastic_dt(Mdouble mass, unsigned int indSpecies=0) | MD | inline |
| get_Points() | StatisticsVector< T > | inline |
| get_PolynomialName() | StatisticsVector< T > | inline |
| get_restart_version() | MD | inline |
| get_restarted() | MD | inline |
| get_restitution_coefficient(Mdouble mass, unsigned int indSpecies=0) | MD | inline |
| get_rho(int indSpecies=0) | MD | inline |
| get_rotation() | MD | inline |
| get_save_count() | MD | inline |
| get_save_count_data() | MD | inline |
| get_save_count_ene() | MD | inline |
| get_save_count_fstat() | MD | inline |
| get_save_count_stat() | MD | inline |
| get_save_data_data() | MD | inline |
| get_save_data_ene() | MD | inline |
| get_save_data_fstat() | MD | inline |
| get_save_data_stat() | MD | inline |
| get_savecount() | MD | inline |
| get_Species(void) | MD | inline |
| get_Species(int i) | MD | inline |
| get_stat_file() | STD_save | inline |
| get_stat_filename() | STD_save | inline |
| get_step_size() | STD_save | inline |
| get_StressTypeForFixedParticles() | StatisticsVector< T > | inline |
| get_superexact() | StatisticsVector< T > | inline |
| get_t() | MD | inline |
| get_TimeAverageReset() | StatisticsVector< T > | inline |
| get_tintStat() | StatisticsVector< T > | inline |
| get_tmax() | MD | inline |
| get_tmaxStat() | StatisticsVector< T > | inline |
| get_tminStat() | StatisticsVector< T > | inline |
| get_verbosity() | StatisticsVector< T > | inline |
| get_w() | StatisticsVector< T > | inline |
| get_w2() | StatisticsVector< T > | inline |
| get_w_over_rmax() | StatisticsVector< T > | inline |
| get_walls() | StatisticsVector< T > | inline |
| get_xballs_additional_arguments() | MD | inline |
| get_xballs_cmode() | MD | inline |
| get_xballs_scale() | MD | inline |
| get_xballs_vscale() | MD | inline |
| get_xmax() | MD | inline |
| get_xmaxStat() | StatisticsVector< T > | inline |
| get_xmin() | MD | inline |
| get_xminStat() | StatisticsVector< T > | inline |
| get_ymax() | MD | inline |
| get_ymaxStat() | StatisticsVector< T > | inline |
| get_ymin() | MD | inline |
| get_yminStat() | StatisticsVector< T > | inline |
| get_zmax() | MD | inline |
| get_zmaxStat() | StatisticsVector< T > | inline |
| get_zmin() | MD | inline |
| get_zminStat() | StatisticsVector< T > | inline |
| getBoundaryHandler() | MD | inline |
| getInfo(BaseParticle &P) | MD | inlinevirtual |
| getLargestParticle() | MD | inlinevirtual |
| getParticleHandler() | MD | inline |
| getSmallestParticle() | MD | inlinevirtual |
| getTangentialSpring(BaseParticle *PI, BaseParticle *PJ, BaseParticle *PJreal) | MD | protected |
| getTangentialSpringWall(BaseParticle *pI, int w) | MD | protected |
| getVelocityProfile(Vec3D Position) | StatisticsVector< T > | protected |
| getWallHandler() | MD | inline |
| HGRID_actions_after_integration() | MD | inlineprotectedvirtual |
| HGRID_actions_before_integration() | MD | inlineprotectedvirtual |
| HGRID_actions_before_time_loop() | MD | inlineprotectedvirtual |
| HGRID_actions_before_time_step() | MD | inlineprotectedvirtual |
| HGRID_InsertParticleToHgrid(BaseParticle *obj UNUSED) | MD | inlineprotectedvirtual |
| HGRID_RemoveParticleFromHgrid(BaseParticle *obj UNUSED) | MD | inlineprotectedvirtual |
| HGRID_update_move(BaseParticle *, Mdouble) | MD | inlineprotectedvirtual |
| HGRID_UpdateParticleInHgrid(BaseParticle *obj UNUSED) | MD | inlineprotectedvirtual |
| hmax | StatisticsVector< T > | protected |
| ignoreFixedParticles | StatisticsVector< T > | protected |
| inc_counter_in_file() | STD_save | |
| increase_counter_data(std::fstream::openmode mode) | STD_save | inline |
| increase_counter_ene(std::fstream::openmode mode) | STD_save | inline |
| increase_counter_fstat(std::fstream::openmode mode) | STD_save | inline |
| increase_counter_stat(std::fstream::openmode mode) | STD_save | inline |
| indSpecies | StatisticsVector< T > | protected |
| info() | MD | inlinevirtual |
| InitBroadPhase() | MD | inlineprotectedvirtual |
| initialize_statistics() | StatisticsVector< T > | virtual |
| initialize_tangential_springs() | MD | protected |
| isMDCLR | StatisticsVector< T > | protected |
| jump_fstat() | StatisticsVector< T > | |
| jump_p3c() | StatisticsVector< T > | |
| launch_new(const char *name, bool quick=false) | STD_save | |
| load_from_data_file(const char *filename, unsigned int format=0) | MD | |
| load_par_ini_file(const char *filename) | MD | |
| load_restart_data() | MD | |
| load_restart_data(std::string filename) | MD | |
| loadVelocityProfile(const char *filename) | StatisticsVector< T > | protected |
| MD() | MD | inline |
| MD(STD_save &other) | MD | inline |
| mirrorAtDomainBoundary | StatisticsVector< T > | protected |
| nTimeAverage | StatisticsVector< T > | protected |
| nTimeAverageReset | StatisticsVector< T > | protected |
| nx | StatisticsVector< T > | protected |
| nxMirrored | StatisticsVector< T > | protected |
| ny | StatisticsVector< T > | protected |
| nyMirrored | StatisticsVector< T > | protected |
| nz | StatisticsVector< T > | protected |
| nzMirrored | StatisticsVector< T > | protected |
| open_counted_file(std::fstream &file, std::string filenameNoCount, std::fstream::openmode mode) | STD_save | inline |
| open_data_file(std::fstream::openmode mode=std::fstream::out) | STD_save | inline |
| open_ene_file(std::fstream::openmode mode=std::fstream::out) | STD_save | inline |
| open_file(std::fstream &file, std::string filename, unsigned int options, std::fstream::openmode mode) | STD_save | inline |
| open_fstat_file(std::fstream::openmode mode=std::fstream::out) | STD_save | inline |
| open_stat_file(std::fstream::openmode mode=std::fstream::out) | STD_save | inline |
| options_data | STD_save | protected |
| options_ene | STD_save | protected |
| options_fstat | STD_save | protected |
| options_restart | STD_save | protected |
| options_stat | STD_save | protected |
| output_ene() | MD | protectedvirtual |
| output_statistics() | StatisticsVector< T > | virtual |
| output_xballs_data() | MD | protectedvirtual |
| output_xballs_data_particle(int i) | MD | protectedvirtual |
| P1 | StatisticsVector< T > | protected |
| P1_P2_CollisionalHeatFlux | StatisticsVector< T > | protected |
| P1_P2_Contact | StatisticsVector< T > | protected |
| P1_P2_ContactCoupleStress | StatisticsVector< T > | protected |
| P1_P2_Dissipation | StatisticsVector< T > | protected |
| P1_P2_distance | StatisticsVector< T > | protected |
| P1_P2_Fabric | StatisticsVector< T > | protected |
| P1_P2_normal | StatisticsVector< T > | protected |
| P1_P2_NormalStress | StatisticsVector< T > | protected |
| P1_P2_NormalTraction | StatisticsVector< T > | protected |
| P1_P2_Potential | StatisticsVector< T > | protected |
| P1_P2_TangentialStress | StatisticsVector< T > | protected |
| P1_P2_TangentialTraction | StatisticsVector< T > | protected |
| P2 | StatisticsVector< T > | protected |
| p3c_file | StatisticsVector< T > | protected |
| p3p_file | StatisticsVector< T > | protected |
| p3w_file | StatisticsVector< T > | protected |
| periodicWalls | StatisticsVector< T > | protected |
| Points | StatisticsVector< T > | protected |
| print() | StatisticsVector< T > | |
| MD::print(std::ostream &os, bool print_all=false) | MD | virtual |
| print_CG() | StatisticsVector< T > | |
| print_help() | StatisticsVector< T > | |
| problem_name | STD_save | protected |
| process_statistics(bool usethese) | StatisticsVector< T > | virtual |
| random | MD | |
| read(std::istream &is) | MD | virtual |
| read_dim_from_data_file() | MD | |
| read_next_from_data_file(unsigned int format) | StatisticsVector< T > | |
| read_next_from_p3p_file() | StatisticsVector< T > | protected |
| read_run_num_from_file() | STD_save | |
| read_v1(std::istream &is) | MD | virtual |
| read_v2(std::istream &is) | MD | virtual |
| readArguments(unsigned int argc, char *argv[]) | MD | |
| readNextArgument(unsigned int &i, unsigned int argc, char *argv[]) | MD | virtual |
| readStatArguments(unsigned int argc, char *argv[]) | StatisticsVector< T > | |
| Remove_Particle(int IP) | MD | |
| removeParticle(int iP) | MD | inlinevirtual |
| reset_DeltaMax() | MD | inlineprotected |
| reset_statistics() | StatisticsVector< T > | virtual |
| reset_TangentialSprings() | MD | inlineprotected |
| rmax | StatisticsVector< T > | protected |
| rmin | StatisticsVector< T > | protected |
| satisfiesInclusionCriteria(BaseParticle *P) | StatisticsVector< T > | protected |
| save_info_to_disk() | STD_save | |
| save_restart_data() | MD | virtual |
| set_append(bool new_) | MD | inline |
| set_CG_type(const char *new_) | StatisticsVector< T > | |
| set_CG_type(CG new_) | StatisticsVector< T > | |
| set_collision_time_and_normal_and_tangential_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble beta, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0) | MD | inline |
| set_collision_time_and_normal_and_tangential_restitution_coefficient_nodispt(Mdouble tc, Mdouble eps, Mdouble beta, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0) | MD | inline |
| set_collision_time_and_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble mass, unsigned int indSpecies=0) | MD | inline |
| set_collision_time_and_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0) | MD | inline |
| set_counter(int new_counter) | STD_save | |
| set_counter_from_file() | STD_save | |
| set_data_filename(std::string filename) | STD_save | inline |
| set_data_filename() | STD_save | inline |
| set_depth(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_dim(int new_dim) | MD | inline |
| set_dim_particle(int new_, unsigned int indSpecies=0) | MD | inline |
| set_disp(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_disprolling(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_dispt(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_disptorsion(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_dissipation(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_do_stat_always(bool new_) | MD | inline |
| set_doGradient(bool new_) | StatisticsVector< T > | inline |
| set_doTimeAverage(bool new_) | StatisticsVector< T > | inline |
| set_doublePoints(bool new_) | StatisticsVector< T > | inline |
| set_doVariance(bool new_) | StatisticsVector< T > | inline |
| set_dt(Mdouble new_dt) | MD | inline |
| set_dt(BaseParticle &P) | MD | inline |
| set_dt() | MD | inline |
| set_dt_by_mass(Mdouble mass) | MD | inline |
| set_ene_ela(Mdouble new_) | MD | inline |
| set_ene_filename(std::string filename) | STD_save | inline |
| set_ene_filename() | STD_save | inline |
| set_file_counter(int new_) | STD_save | inline |
| set_FixedParticles(unsigned int n) | MD | inlineprotected |
| set_format(int new_) | MD | inline |
| set_fstat_filename(std::string filename) | STD_save | inline |
| set_fstat_filename() | STD_save | inline |
| set_gravity(Vec3D new_gravity) | MD | inline |
| set_h(Mdouble h) | StatisticsVector< T > | inline |
| set_hmax(Mdouble new_) | StatisticsVector< T > | inline |
| set_hx(Mdouble hx) | StatisticsVector< T > | inline |
| set_hy(Mdouble hy) | StatisticsVector< T > | inline |
| set_hz(Mdouble hz) | StatisticsVector< T > | inline |
| set_ignoreFixedParticles(bool new_) | StatisticsVector< T > | inline |
| set_infiniteStressForFixedParticles(bool new_) | StatisticsVector< T > | inline |
| set_initial_pressures_for_pressure_controlled_walls() | MD | inlineprotectedvirtual |
| set_k(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_k1(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_k2max(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_k_and_restitution_coefficient(Mdouble k_, Mdouble eps, Mdouble mass, unsigned int indSpecies=0) | MD | inline |
| set_kc(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_krolling(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_kt(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_ktorsion(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_mirrorAtDomainBoundary(Mdouble new_) | StatisticsVector< T > | inline |
| set_MixedSpecies(int i, int j, CSpecies &S) | MD | inline |
| set_mu(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_murolling(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_mutorsion(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_n(int n) | StatisticsVector< T > | inline |
| set_n(int nx_, int ny_, int nz_) | StatisticsVector< T > | inline |
| set_name(const char *name) | MD | inline |
| set_number_of_saves(Mdouble N) | MD | inline |
| set_number_of_saves_all(Mdouble N) | MD | inline |
| set_number_of_saves_data(Mdouble N) | MD | inline |
| set_number_of_saves_ene(Mdouble N) | MD | inline |
| set_number_of_saves_fstat(Mdouble N) | MD | inline |
| set_number_of_saves_stat(Mdouble N) | MD | inline |
| set_nx(int new_) | StatisticsVector< T > | inline |
| set_nx(int new_ UNUSED) | StatisticsVector< T > | |
| set_nx(int new_ UNUSED) | StatisticsVector< T > | |
| set_nx(int new_ UNUSED) | StatisticsVector< T > | |
| set_nx(int new_ UNUSED) | StatisticsVector< T > | |
| set_ny(int new_) | StatisticsVector< T > | inline |
| set_ny(int new_ UNUSED) | StatisticsVector< T > | |
| set_ny(int new_ UNUSED) | StatisticsVector< T > | |
| set_ny(int new_ UNUSED) | StatisticsVector< T > | |
| set_ny(int new_ UNUSED) | StatisticsVector< T > | |
| set_nz(int new_) | StatisticsVector< T > | inline |
| set_nz(int new_ UNUSED) | StatisticsVector< T > | |
| set_nz(int new_ UNUSED) | StatisticsVector< T > | |
| set_nz(int new_ UNUSED) | StatisticsVector< T > | |
| set_nz(int new_ UNUSED) | StatisticsVector< T > | |
| set_options_data(unsigned int new_) | STD_save | inline |
| set_options_ene(unsigned int new_) | STD_save | inline |
| set_options_fstat(unsigned int new_) | STD_save | inline |
| set_options_restart(unsigned int new_) | STD_save | inline |
| set_options_stat(unsigned int new_) | STD_save | inline |
| set_periodicWalls(bool new_) | StatisticsVector< T > | inline |
| set_plastic_k1_k2max_kc_depth(Mdouble k1_, Mdouble k2max_, Mdouble kc_, Mdouble depth_, unsigned int indSpecies=0) | MD | inline |
| set_Polynomial(std::vector< Mdouble > new_coefficients, unsigned int new_dim) | StatisticsVector< T > | inline |
| set_Polynomial(Mdouble *new_coefficients, unsigned int num_coeff, unsigned int new_dim) | StatisticsVector< T > | inline |
| set_PolynomialName(const char *new_name) | StatisticsVector< T > | inline |
| set_Positions() | StatisticsVector< T > | |
| set_restart_version(int new_) | MD | inline |
| set_restarted(bool new_) | MD | inline |
| set_rho(Mdouble new_, unsigned int indSpecies=0) | MD | inline |
| set_rmax(Mdouble new_) | StatisticsVector< T > | inline |
| set_rmin(Mdouble new_) | StatisticsVector< T > | inline |
| set_rotation(bool new_) | MD | inline |
| set_save_count_all(int new_) | MD | inline |
| set_save_count_data(int new_) | MD | inline |
| set_save_count_ene(int new_) | MD | inline |
| set_save_count_fstat(int new_) | MD | inline |
| set_save_count_stat(int new_) | MD | inline |
| set_savecount(int new_) | MD | inline |
| set_stat_filename(std::string filename) | STD_save | inline |
| set_stat_filename() | STD_save | inline |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_statType() | StatisticsVector< T > | |
| set_step_size(unsigned int new_) | STD_save | inline |
| set_StressTypeForFixedParticles(int new_) | StatisticsVector< T > | inline |
| set_superexact(bool new_) | StatisticsVector< T > | inline |
| set_t(Mdouble new_t) | MD | inline |
| set_TimeAverageReset(int new_) | StatisticsVector< T > | inline |
| set_tintStat(Mdouble t) | StatisticsVector< T > | inline |
| set_tmax(Mdouble new_tmax) | MD | inline |
| set_tmaxStat(Mdouble t) | StatisticsVector< T > | inline |
| set_tminStat(Mdouble t) | StatisticsVector< T > | inline |
| set_verbosity(int new_) | StatisticsVector< T > | inline |
| set_w(Mdouble w) | StatisticsVector< T > | inline |
| set_w2(Mdouble new_) | StatisticsVector< T > | |
| set_w_over_rmax(Mdouble new_) | StatisticsVector< T > | inline |
| set_walls(bool new_) | StatisticsVector< T > | inline |
| set_xballs_additional_arguments(std::string new_) | MD | inline |
| set_xballs_cmode(int new_cmode) | MD | inline |
| set_xballs_colour_mode(int new_cmode) | MD | inline |
| set_xballs_scale(Mdouble new_scale) | MD | inline |
| set_xballs_vector_scale(double new_vscale) | MD | inline |
| set_xmax(Mdouble new_xmax) | MD | inline |
| set_xmaxStat(Mdouble xmaxStat_) | StatisticsVector< T > | inline |
| set_xmin(Mdouble new_xmin) | MD | inline |
| set_xminStat(Mdouble xminStat_) | StatisticsVector< T > | inline |
| set_ymax(Mdouble new_ymax) | MD | inline |
| set_ymaxStat(Mdouble ymaxStat_) | StatisticsVector< T > | inline |
| set_ymin(Mdouble new_ymin) | MD | inline |
| set_yminStat(Mdouble yminStat_) | StatisticsVector< T > | inline |
| set_zmax(Mdouble new_zmax) | MD | inline |
| set_zmaxStat(Mdouble zmaxStat_) | StatisticsVector< T > | inline |
| set_zmin(Mdouble new_zmin) | MD | inline |
| set_zminStat(Mdouble zminStat_) | StatisticsVector< T > | inline |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setInfinitelyLongDistance() | StatisticsVector< T > | |
| setup_particles_initial_conditions() | MD | virtual |
| solve() | MD | |
| solve(unsigned int argc, char *argv[]) | MD | inline |
| solveWithMDCLR() | MD | |
| Species | MD | protected |
| start_ene() | MD | protectedvirtual |
| stat_file | STD_save | protected |
| stat_filename | STD_save | protected |
| statistics_from_fstat_and_data() | StatisticsVector< T > | |
| statistics_from_p3() | StatisticsVector< T > | |
| statistics_from_restart_data(const char *name) | MD | |
| StatisticsVector() | StatisticsVector< T > | inline |
| StatisticsVector(std::string name) | StatisticsVector< T > | inline |
| StatisticsVector(StatisticsVector &other) | StatisticsVector< T > | |
| StatisticsVector(unsigned int argc, char *argv[]) | StatisticsVector< T > | |
| statType | StatisticsVector< T > | protected |
| STD_save() | STD_save | inline |
| STD_save(STD_save &other) | STD_save | inline |
| step_size | STD_save | protected |
| StressTypeForFixedParticles | StatisticsVector< T > | protected |
| superexact | StatisticsVector< T > | protected |
| timeAverage | StatisticsVector< T > | protected |
| timeVariance | StatisticsVector< T > | protected |
| tintStat | StatisticsVector< T > | protected |
| tmaxStat | StatisticsVector< T > | protected |
| tminStat | StatisticsVector< T > | protected |
| VelocityProfile | StatisticsVector< T > | protected |
| VelocityProfile_D | StatisticsVector< T > | protected |
| VelocityProfile_Min | StatisticsVector< T > | protected |
| verbose() | StatisticsVector< T > | inline |
| verbosity | StatisticsVector< T > | protected |
| w2 | StatisticsVector< T > | protected |
| w_over_rmax | StatisticsVector< T > | protected |
| walls | StatisticsVector< T > | protected |
| write(std::ostream &os) | MD | virtual |
| write_statistics() | StatisticsVector< T > | |
| write_time_average_statistics() | StatisticsVector< T > | |
| write_v1(std::ostream &os) | MD | virtual |
| xmaxStat | StatisticsVector< T > | protected |
| xminStat | StatisticsVector< T > | protected |
| ymaxStat | StatisticsVector< T > | protected |
| yminStat | StatisticsVector< T > | protected |
| zmaxStat | StatisticsVector< T > | protected |
| zminStat | StatisticsVector< T > | protected |
| ~MD() | MD | inlinevirtual |
1.8.7 
